Felix T. Hong
Dept. of Physiology,
Wayne State University,
Detroit, MI 48201 USA
Can a single
molecule possess intelligence? The
answer depends on what one means by intelligence.
One tends to associate intelligence with what a human
brain can do: perception, memory, thinking, problem
solving, learning, innovation, creativity, etc. A
personal digital computer can do some of these tasks
and, in performing certain types of tasks, appears to
surpass the human brain. But in terms of the more
sophisticated aspects of intelligence such as pattern
recognition in an ambiguous situation and creativity,
a personal computer is no match even to a modest
human brain.
A human can do much more than "walk and chew
gum" at the same time. While a human being is
listening, talking and thinking, the body parts are
quietly performing the diverse tasks of providing
oxygen and nutrients to individual cells and managing
wastes generated in the process of nutrient
utilization, fighting invading microorganisms and
repairing damaged parts, all without the conscious
intervention of a human being. In the computerese
language, what the human body possesses is the
capability of massively parallel distributed
information processing.
In contrast to humans, a personal computer has "one-track" mind, capable of
doing only one thing at a time. However, computers have such astonishing raw
power and speed in terms of number crunching and
chore management that they gave us the illusion of
being capable of doing many things simultaneously and
serving many users at the same time (time-sharing).
In reality, this cannot be farther from the truth.
In fact, most of the machine parts are idling most of
the time. Imagine the situation if governmental
decisions at all levels required the personal
approval of the President, one at a time. In view of
this bureaucratic obstacle, known as the "von Neumann
bottleneck," remedy has been sought in terms of
parallel distributed processing. But conventional
parallel processing is like setting up several
agencies to handle similar and related tasks: they
don't communicate well with each other and certainly
not on a minute-by-minute basis. Thus, the need to
explore radically different computer architectures so
as to improve the overall intelligence of a computer
is especially acute.
Another important determinant in pursuing
improved computer performance is miniaturization.
The increasing degree of miniaturization of the
individual components (integrated circuits, or simply
IC) results in increasing capabilities of each device
component, increasing speed of operation of these
devices, decreasing consumption of energy, decreasing
size and weight of the finished product, and, last
but not least, a decrease in price. It may seem that
continuing miniaturization could make possible the
implementation of better computer architectures, but
physicists and engineers see the dead end as the
physical limits imposed by quantum and thermal
fluctuation phenomena are rapidly approached and the
operation of these miniature devices becomes less and
less reliable.
The recognition of these ultimate limits has
inspired computer scientists to seek inspiration from
biology. This is because a living organism operates
with functional elements which are of molecular
dimensions (about one thousandth of the size of a
transistor) and which actually exploit quantum and
thermal fluctuation phenomena. The hope of breaking
the barrier of miniaturization seems to lie in the
utilization of organic and biological materials, and
the exploitation of their chemistry, and in the
utilization of radically different computer
architectures. This line of thinking has ushered in
a new science and technology: molecular electronics,
which is sometimes also referred to as
nanotechnology.
The new science and technology calls for
research and development in three related areas:
novel materials, novel fabrication technology, and
novel computer architectures. These three aspects
actually go hand in hand; the progress in one area
depends on that made in the other two areas. Novel
computer architectures require materials with
extraordinary properties to implement, and new
techniques to assemble the required "hardware." The
entire field of molecular electronics thus requires
joint, integrated efforts of scientists and engineers
of different backgrounds; it is truly an
interdisciplinary and multidisciplinary endeavor.
As we shall see, the development of intelligent
materials is fundamentally important not just for the
goal of further device miniaturization but also for
the evolution of the ultimate machine intelligence -
the kind of intelligence that allows for learning and
innovation, and allows for decision-making in a fuzzy
situation when many conflicting requirements coexist.
Until recently, biomaterials have not been
seriously considered for device construction because
they were perceived as too fragile and not durable
enough. A number of years ago, Nikolai Vsevolodov
and his colleagues [1] in the Institute of Biological
Physics, Pushchino, Russia, excited the biomedical
research community by producing the first imaging
device and microfilm made primarily of biological
materials and entirely organic materials (named the "Biochrom" film). The key
substance in this device
is bacteriorhodopsin.
More recently, Robert Birge's
group at Syracuse University [2] has devoted
considerable efforts to developing a high-speed
optical random access memory based on
bacteriorhodopsin. In the remaining portion of this
article, we shall examine some salient features of
bacteriorhodopsin to illustrate the concept of
intelligent materials. With the advent of genetic
engineering, the intelligence of a biomolecule
originally acquired through evolution can be further
improved by breeding it in the laboratory in a much
shorter time. Thus, molecular engineering will fast
become one of the key technologies for the
implementation of molecular electronics.
Bacteriorhodopsin is a purple-colored pigment
occurring in natural abundance in the cell membrane
of Halobacterium halobium [3]. The pigment derives
its name from the resemblance of its chemical
structure and properties to those of the eye pigment
rhodopsin (the key material component in the "reusable microfilm" in our eye).
Curiously enough,
the natural function of this pigment is to convert
sunlight into electrical and chemical energy for the
benefit of the bacteria. In other words, these
bacteria utilize an eye pigment for photosynthesis.
It is tempting to describe bacteriorhodopsin as
a naturally occurring solar cell, but that would be
an oversimplification as well as a misleading notion.
This is because the operation of bacteriorhodopsin
requires that the photopigment be incorporated in a
membrane: it cannot work alone. Its operating
principle is analogous to that of a hydroelectric
power generator. The immediate source of energy in
hydroelectric power generation is the energy stored
as the difference in the water level across a dam;
the difference in the water level is of course
created by the solar energy through evaporation of
water and subsequent rainfalls upstream to the dam.
In the case of the purple membrane, the membrane is
the "dam" and bacteriorhodopsin is the "pump" that
utilizes solar energy to move protons across the
membrane, resulting in a difference in proton levels
(a proton is the nucleus of a hydrogen atom). This
difference in proton levels can then be utilized to
turn on the ATP synthetase (the "turbine"), which
synthesizes the universal energy currency in the
world of living cells known as ATP (adenosine
triphosphate).
The basic mechanism just mentioned was
discovered almost two decades ago by Walther
Stoeckenius (University of California, San Francisco)
and Dieter Oesterhelt (Max Planck Institute, Munich)
[4]. Obviously, the basic research on
bacteriorhodopsin is very important in explaining the
fundamental principle of photosynthesis and solar
energy conversion.
My own interest in this subject
stems from the discovery of a fast light-induced
electric signal in the bacteriorhodopsin membrane by
Mauricio Montal (University of California, San Diego)
[5] and his colleagues. This electric signal bears a
striking resemblance to a bioelectric signal known as
the early receptor potential, which was discovered by
Kenneth Brown (University of California, San
Francisco) and Motohiko Murakami (Keio University
School of Medicine, Tokyo) in monkey eyes in 1964
[6].
To make a long story short, we discovered that
these electric signals can be generated from two
types of light-induced charge separation. One type
of charge separation is completely confined to the
inside of the membrane when the chromophore (the
light-absorbing part of the molecule, which is the
attached vitamin A aldehyde) is excited by light.
This process generates an electric signal which
appears almost instantly after the photon is absorbed
(i.e., the signal appears only with the delay of a
few trillionths of a second at most). This signal is
called the R1 component of the early receptor
potential and the B1 component of the similar signal
of bacterial origin.
The second type of charge
separation occurs at the membrane surface. This
process occurs when the membrane-bound pigment binds
a proton from the adjacent intracellular water phase
and when it releases a proton to the extracellular
water environment. The latter process at the two
membrane surfaces generates two electric signal
components which we named B2 and B2', respectively.
Our task was to distinguish between the two types of
charge separation experimentally and to resolve
(separate) the two components B2 and B2', of similar
origins.
The experimental strategy is readily
suggested by visualizing the bacteriorhodopsin
molecule as the continental US, which borders on two
oceans (two aqueous solutions on either side of the
membrane). Imagine that protons are being imported,
transported across the continent by highway, and
exported from the opposite coast. Clearly, it takes
a longer time to move the merchandise across the
continent than to load it or to unload it at the
docks. Therefore, warehouses are needed at both
coasts to store the merchandise temporarily. Thus,
in the short term, the loading and unloading
activities at the two coasts can be considered
independent of each other.
For example, a longshoremen's strike at one coast will not affect
the loading/unloading activities at the other coast
for a short period until the stock is running low or
until the warehouse is overfilled. In contrast, the
news about the strike gets transmitted across the
continent via electronic media almost instantly.
Another
related analogy suggests an experimental approach to resolve the B2 from
the B2' component.
That is, the weather forecast for Korea seldom apply
to India. This simple conclusion is translated into
a concept of local reaction conditions for a
membrane-bound protein such as bacteriorhodopsin.
The proton transfer reactions at each exposed surface
of bacteriorhodopsin depend on the conditions of the
adjacent water phase but not directly on those of the
opposite water phase, at least on a short time scale.
Thus, if the proton concentration in the
intracellular water phase is changed, the B2
component should be affected but not the B2'
component. The situation will be similar with the
role of B2 and B2' reversed, if the proton
concentration in the extracellular water phase is
changed. The B1 component, being generated in a
region which is not exposed to water, is insensitive
to the proton concentration in the two water phases
on either side of the membrane. This was indeed the case when the suggested experiment was performed.
But why do the pH changes
affect the two signal components? There are two
possibilities: one is expected from the law of mass
action and the other is the pH-induced change of the
binding constant of the surface proton binding
groups.
Getting back to the analogy of proton
import/export across a continent, the proton import
at the east coast will be affected by the
availability of the merchandise from the supplier
(higher proton concentration there means greater
availability). Likewise, the proton export at the
west coast will be affected by the demand of the
merchandise from the trade partner (lower proton
concentration in water means greater demand).
The other possibility, given unfavorable conditions in
supply and demand, is to change the trading policy.
Thus, if the supply of protons to the east coast is
diminishing, the trade policy would call for
increasing proton grabbing power there. Likewise, if
the demand of protons at the west coast is
diminishing, the trade negotiation could force the
partner politically or persuade the partner
diplomatically to buy them even if there is no real
demand.
The experimental result showed the preponderance
of the second possibility. Decreased intracellular
proton concentration actually increases the proton
uptake by bacteriorhodopsin, and increased
extracellular proton concentration increases the
proton release there, contrary to the expectation of
the law of mass action. This finding demonstrates
the intelligence of bacteriorhodopsin because this
peculiar feature has a survival value.
Theoretically speaking, the proton pump would work even without the pH-dependent changes of the proton binding constant.
However, like any mechanical pump, the efficiency of
the pump can be diminished as a result of its own
pumping action. The hydrostatic pressure built up by
pumping water into a reservoir will render the pump
less and less efficient. Likewise, proton pumping by
the purple membrane will increase the extracellular
proton concentration but will reduce the
intracellular concentration. These resulting proton concentration changes will inhibit proton binding at the intracellular surface and inhibit proton release at the extracellular surface, and, thus, diminishes the pumping efficiency.
If, however, the resulting pH changes also causes the protein to readjust its
proton binding constants, the difficulty can be partially relieved. It is as
if a water pump could
increase its horsepower when it encountered the back
pressure built up in the reservoir. In this way,
bacteriorhodopsin adjusts its functionality to meet
the demands of environmental changes. This behavior
is unique to macromolecules and is summed up in the
concept of intelligent materials. According to the
Minister of State for Science and Technology of Japan
[7], intelligent materials are "substances/materials
with the ability to respond to environmental
conditions intelligently and manifest their
functions."
The concept of intelligent materials was
initially proposed to promote the idea of
designing/synthesizing materials with a
microstructure so that both sensors and actuators are
embedded throughout [8]. For example, in the
construction of airplane wings, the purpose is to
allow the material to sense the changing loads or the
condition of external stress as a result of damages,
so as to adjust its mechanical characteristics in
order to compensate for the changes.
Several scientific workshops on this topic have been held in
the past few years. As the concept evolved through
those workshops, the consensus of the definition of
the concept began to diverge, and the concept became
less well-defined. This trend is apparently the
consequence of increased research activities in this
areas. As new and different facets of intelligence
in materials are being revealed, the definition must
then be modified and generalized to accommodate the
new findings.
Proteins are particularly suitable to be
exploited as intelligent materials, as they have
already acquired significant degrees of intelligence
through evolution. Proteins could be further
modified by genetic engineering to custom-tailor
their functional properties to suit the intended
technological applications. The use of a
bacteriorhodopsin mutant as a reversible holographic
medium (Paper by Norbert Hampp [9] in this Symposium)
and the use of chemically modified bacteriorhodopsin
for construction of "Biochrom" films (Papers by N. N.
Vsevolodov and by A. B. Druzhko in this Symposium)
are existing successful examples.
Richard Needleman at the Department of Biochemistry, Wayne State
University, recently developed a new expression
system for the purpose of engineering mutants of
bacteriorhodopsin [10]. Preliminary results showed
that by changing the genetic code of one out of 248
amino acid units, the pigment changes its electrical
characteristics and photonic characteristics
dramatically. This raises the hope of breeding
mutants with the right type of intelligence for the
intended design of the molecular device.
The development of intelligent materials is in
keeping with the goal of miniaturization at the
nanometer scale (one nanometer = one billionth of a
meter) (nanotechnology). For example, by allowing
sensor/processor/actuator capabilities to be packaged
into a single molecule or a supramolecular cluster,
avenues are open in the design of integrated
information processing systems with massively
parallel distributed processing capabilities. Thus,
the progress made in the research of intelligent
materials will pave the road towards the development
of novel information processing systems so as to
overcome the much-dreaded "von Neumann bottleneck" that characterizes conventional
computers.
21st, The VXM Network, https://vxm.com